CDS

Accession Number TCMCG051C06536
gbkey CDS
Protein Id XP_002300807.1
Location join(2897523..2897705,2898214..2898360,2898433..2898498,2898816..2898924,2899093..2899169,2899617..2899694,2899821..2899898,2900045..2900104,2900187..2900321)
Gene LOC7472004
GeneID 7472004
Organism Populus trichocarpa

Protein

Length 310aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002300771.3
Definition tryptophan synthase alpha chain [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the TrpA family
KEGG_TC -
KEGG_Module M00023        [VIEW IN KEGG]
KEGG_Reaction R00674        [VIEW IN KEGG]
R02340        [VIEW IN KEGG]
R02722        [VIEW IN KEGG]
KEGG_rclass RC00209        [VIEW IN KEGG]
RC00210        [VIEW IN KEGG]
RC00700        [VIEW IN KEGG]
RC00701        [VIEW IN KEGG]
RC02868        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01695        [VIEW IN KEGG]
ko:K13222        [VIEW IN KEGG]
EC 4.1.2.8        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
4.2.1.20        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00260        [VIEW IN KEGG]
ko00400        [VIEW IN KEGG]
ko00402        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01230        [VIEW IN KEGG]
map00260        [VIEW IN KEGG]
map00400        [VIEW IN KEGG]
map00402        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01230        [VIEW IN KEGG]
GOs GO:0000162        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004834        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006520        [VIEW IN EMBL-EBI]
GO:0006568        [VIEW IN EMBL-EBI]
GO:0006576        [VIEW IN EMBL-EBI]
GO:0006586        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008652        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009072        [VIEW IN EMBL-EBI]
GO:0009073        [VIEW IN EMBL-EBI]
GO:0009308        [VIEW IN EMBL-EBI]
GO:0009309        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009606        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009629        [VIEW IN EMBL-EBI]
GO:0009630        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016053        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016836        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033037        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042401        [VIEW IN EMBL-EBI]
GO:0042430        [VIEW IN EMBL-EBI]
GO:0042435        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042742        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044106        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0046219        [VIEW IN EMBL-EBI]
GO:0046394        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0052386        [VIEW IN EMBL-EBI]
GO:0052482        [VIEW IN EMBL-EBI]
GO:0052542        [VIEW IN EMBL-EBI]
GO:0052543        [VIEW IN EMBL-EBI]
GO:0052544        [VIEW IN EMBL-EBI]
GO:0052545        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901605        [VIEW IN EMBL-EBI]
GO:1901607        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTGCTGCTCTGAAATCAACTCCTTCCTTCCTCCAACTGAAAAAACCAGAGACCCATTTCCTCGTCCGTCACAAACCCACTATCGTTTCAACCAGAAGGTTCGCGCCAATGGCTTCTCTCACTGCAATCCGAAGTCTTGGCATTGGAGAAACGTTCTCCAATCTCAAAAAACAAGGCAAAGTGGCGCTCATCCCATACATCACAGCTGGTGATCCTGATCTTAAAACCACAGCGGAAGCCTTGAAGGTGCTGGACGCCTGTGGATGTGACATAATTGAACTAGGTGTTCCTTACTCCGATCCCCTGGCAGATGGTCCGGTTATCCAGGCGGCAGCTACACGCTCCTTGGCTAGAGGGACCAATTTTGAAGCGATCACATCAATGTTAAGGGAGGTCGTTCCACAAGTATCCTGTCCAATTGCTTTATTTACATATTACAATCCAATTCTAAAGCGTGGAATTGAGAAGTTTATGTCCACTGTAAAAGACATTGGCGTACATGGACTTGTGGTCCCAGATGTTCCTCTGGAGGAGACTGGAGTTCTGAGGAAGGAAGCTGTCAAGAATAAGCTTGAACTGGTACTTCTTACAACGCCCACTACTCCTACGGAACGCATGAAAGCCATTGTTGAAGCAGCAGATGGATTTGTGTATCTTGTGAGCTCAGTTGGAGTTACTGGCGCTCGTGCTTCTGTAAGTGACCGAGTTCAAACTCTTCTCCGGGATATTAAAGAGTCAACAACCAAGCCTGTAGCTGTTGGCTTTGGTATATCAAAACCTGAGCATGTCAAGCAGGTTGCAGCATGGGGTGCTGATGGTGTCATTGTTGGTAGTGCCATGGTGAAGTTGTTGGGTGAAGCAAAATCTCCCGAGGAAGGATTGAAGGAACTAGAGAGTTTCACGAAATCTTTAAAAGCTGCACTTCCTTGA
Protein:  
MAAALKSTPSFLQLKKPETHFLVRHKPTIVSTRRFAPMASLTAIRSLGIGETFSNLKKQGKVALIPYITAGDPDLKTTAEALKVLDACGCDIIELGVPYSDPLADGPVIQAAATRSLARGTNFEAITSMLREVVPQVSCPIALFTYYNPILKRGIEKFMSTVKDIGVHGLVVPDVPLEETGVLRKEAVKNKLELVLLTTPTTPTERMKAIVEAADGFVYLVSSVGVTGARASVSDRVQTLLRDIKESTTKPVAVGFGISKPEHVKQVAAWGADGVIVGSAMVKLLGEAKSPEEGLKELESFTKSLKAALP